SKILLS & AGENTS/Skill 与 Agent·MULTI-AGENT
bioMate-AI/biomate-bioconductor-kb
BioMate-KB Bioconductor Skills — 200 packages (top 100 by downloads + 100 rising stars) as vignette-grounded Claude/agent skills, with per-package workflow r…
怎么装：Install: git clone https://github.com/bioMate-AI/biomate-bioconductor-kb.git
02 / 现在的位置02 / Why now
首次发现FIRST SEEN
04 OCT 202604 OCT 2026
增长GROWTH
+0.0%+0.0%
804 → 804 stars · 4 个快照804 → 804 stars · 4 snapshots
状态STATUS
长期未更新Not updated
03 / 它能帮你做什么03 / What it helps you do
04 / 安装04 / Install
$ README 里给出的安装方式。The installation method given in the README.
$ README 里给出的安装方式。The installation method given in the README.
两种装法选一个即可 —— 上面那条给命令行用户，下面那条给写代码的用户。Pick one of the two — the first is for command-line users, the second for people writing code.
05 / 限制与风险05 / Limits and risk
风险不是警告，是可信度的一部分。以下结论只基于文档静态扫描，我们不会执行项目里的任何代码。Risk here is evidence, not an alarm. These findings come from static scanning of the docs; we never execute a project’s code.
限制LIMITS
未知Unknown
静态扫描STATIC SCAN
在 README、SKILL.md 和依赖清单中没有匹配到已知风险模式。No known risk patterns matched in the README, SKILL.md or dependency list.这不等于安全that does not mean it is safe，只能说明文档里没写。 — only that the docs do not mention it.
这里只做静态扫描：读 README、SKILL.md 和依赖清单，不执行代码。没有命中不代表安全。This is static scanning only: we read the README, SKILL.md and dependency list, and never execute code. No findings does not mean safe.
{
"agents": [
{
"agent": "claude-code",
"evidence": "readme: …0 rising stars — formatted as Claude Code Skills.** A skill bundle in…"
}
],
"apiKey": null,
"docker": null,
"taxonomy": {
"scores": {
"design": 0,
"ai-tools": 0,
"dev-tools": 0,
"indie-web": 0,
"skill-agent": 2,
"productivity": 0
},
"primary": "skill-agent",
"secondary": "multi-agent"
},
"localRuntime": null,
"skillMdTotal": 200,
"skillMdErrors": [
{
"path": "skills/epigenomics/epigrahmm/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/epigenomics/extrachips/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/epigenomics/hicdcplus/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/epigenomics/hicexperiment/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/epigenomics/hicontacts/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/epigenomics/macsr/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/epigenomics/miasim/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/general/faers/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/general/immunotation/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
},
{
"path": "skills/general/mosbi/SKILL.md",
"error": "Nested mappings are not allowed in compact mappings at line 3, column 14:"
}
],
"treeTruncated": false,
"categoryScores": {
"data": 1,
"agent": 0,
"media": 0,
"design": 0,
"browser": 0,
"devtool": 0,
"security": 0,
"marketing": 1,
"productivity": 0
},
"classification": [
{
"signal": "42 SKILL.md with name + description",
"weight": 0.95
},
{
"signal": "skills/ directory with 200 markdown files",
"weight": 0.75
},
{
"signal": "README describes a Claude / Agent Skill",
"weight": 0.7
},
{
"signal": "description mentions AI",
"weight": 0.2
}
],
"scannedSources": [
"readme",
"skills/annotation/biomart/SKILL.md",
"skills/annotation/kegggraph/SKILL.md",
"skills/enrichment/enrichplot/SKILL.md",
"skills/enrichment/reactomepa/SKILL.md",
"skills/epigenomics/bumphunter/SKILL.md",
"skills/epigenomics/chipseeker/SKILL.md",
"skills/epigenomics/epigrahmm/SKILL.md",
"skills/epigenomics/extrachips/SKILL.md",
"skills/epigenomics/hicdcplus/SKILL.md",
"skills/epigenomics/hicexperiment/SKILL.md",
"skills/epigenomics/hicontacts/SKILL.md",
"skills/epigenomics/macsr/SKILL.md",
"skills/epigenomics/miasim/SKILL.md",
"skills/epigenomics/minfi/SKILL.md",
"skills/general/basilisk/SKILL.md",
"skills/general/biobase/SKILL.md",
"skills/general/biovizbase/SKILL.md",
"skills/general/dose/SKILL.md",
"skills/general/experimenthub/SKILL.md",
"skills/general/faers/SKILL.md",
"skills/general/gdsfmt/SKILL.md",
"skills/general/genefilter/SKILL.md",
"skills/general/geneplotter/SKILL.md",
"skills/general/graphite/SKILL.md",
"skills/general/gypsum/SKILL.md",
"skills/general/immunotation/SKILL.md",
"skills/general/mosbi/SKILL.md",
"skills/general/multiassayexperiment/SKILL.md",
"skills/general/pcamethods/SKILL.md",
"skills/general/qvalue/SKILL.md",
"skills/general/residualmatrix/SKILL.md",
"skills/general/seqlogo/SKILL.md",
"skills/general/topgo/SKILL.md",
"skills/genomics/annotate/SKILL.md",
"skills/genomics/beer/SKILL.md",
"skills/genomics/biocviews/SKILL.md",
"skills/genomics/biostrings/SKILL.md",
"skills/genomics/bsgenome/SKILL.md",
"skills/genomics/clusterprofiler/SKILL.md",
"skills/genomics/cogeqc/SKILL.md",
"skills/genomics/complexheatmap/SKILL.md",
"skills/genomics/consensusclusterplus/SKILL.md",
"skills/genomics/decipher/SKILL.md",
"skills/genomics/dnacopy/SKILL.md",
"skills/genomics/doubletrouble/SKILL.md",
"skills/genomics/epialleler/SKILL.md",
"skills/genomics/genomicalignments/SKILL.md",
"skills/genomics/genomicfeatures/SKILL.md",
"skills/genomics/genomicranges/SKILL.md",
"skills/genomics/ggbio/SKILL.md",
"skills/genomics/ggmanh/SKILL.md",
"skills/genomics/ggtree/SKILL.md",
"skills/genomics/gosemsim/SKILL.md",
"skills/genomics/gviz/SKILL.md",
"skills/genomics/keggrest/SKILL.md",
"skills/genomics/lintind/SKILL.md",
"skills/genomics/msa2dist/SKILL.md",
"skills/genomics/organismdbi/SKILL.md",
"skills/genomics/rblast/SKILL.md",
"skills/genomics/rsamtools/SKILL.md"
],
"skillMdFetched": 60
}